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Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one.
Version: 2.2.1 License: Boost-1
GitHub
| Maintainers | ryandesign |
| Categories | science biology |
| Homepage | http://cole-trapnell-lab.github.io/cufflinks/ |
| Platforms | darwin |
| Variants |
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"cufflinks" depends on
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