samtools

v 1.16.1 Updated: 2 weeks, 4 days ago

Tools for alignments in the SAM format

SAM (Sequence Alignment/Map) Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.

https://www.htslib.org

To install samtools, paste this in macOS terminal after installing MacPorts

sudo port install samtools

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