bowtie (science/bowtie) Add to my watchlist

an ultrafast, memory-efficient short read aligner

Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).

Version: 1.2.3 License: Artistic-1 and LGPL-3+ GitHub
Maintainers MarcusCalhoun-Lopez
Categories science biology
Homepage http://bowtie-bio.sourceforge.net/
Platforms darwin
Variants -

"bowtie" depends on

lib (2)
run (1)
build (2)

Ports that depend on "bowtie"

No ports


Port Health:

Loading Port Health

Installations (30 days)

0

Requested Installations (30 days)

0

Livecheck results

bowtie seems to have been updated (port version: 1.2.3, new version: 1.3.1)

livecheck ran: 1 day, 4 hours ago