{"name":"bowtie","portdir":"science/bowtie","version":"1.3.1","license":"Artistic-1 and LGPL-3+","platforms":"darwin","epoch":0,"replaced_by":null,"homepage":"https://bowtie-bio.sourceforge.net","description":"an ultrafast, memory-efficient short read aligner","long_description":"Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).","active":true,"categories":["science","biology"],"maintainers":[{"name":"mcalhoun","github":"MarcusCalhoun-Lopez","ports_count":1599}],"variants":[],"dependencies":[{"type":"build","ports":["seqan-1","clang-18"]},{"type":"lib","ports":["zlib"]},{"type":"run","ports":["python313"]}],"depends_on":[]}