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program for aligning and scoring two profile hidden Markov models

PRC is a stand-alone program for aligning and scoring two profile hidden Markov models. This can be used to detect remote relationships between profiles more effectively than by doing simple profile-sequence comparisons. PRC takes into account all transition and emission probabilities in both hidden Markov models. PRC can read SAM, HMMER, PSI-BLAST and FASTA files.

Version: 1.5.6 License: GPL-2+ GitHub
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2025-Nov-24 to 2025-Dec-24


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