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MD Display turns molecular dynamics trajectory data into a colorful, animated, on-screen movie. Key features include: Mouse control of translation, rotation, scaling, and clipping. Half-bond coloring controls. Animation speed and direction controls. Dynamic monitoring of distances, bond angles, dihedrals, and hydrogen bonds. Superimposition of static initial or average reference structures. Ramachandron plots. Real-time filtering of higher frequency molecular motions. PDB dump feature, for extracting movie frames on-the-fly.

MD Display turns molecular dynamics trajectory data into a colorful, animated, on-screen movie. Key features include: Mouse control of translation, rotation, scaling, and clipping. Half-bond coloring controls. Animation speed and direction controls. Dynamic monitoring of distances, bond angles, dihedrals, and hydrogen bonds. Superimposition of static initial or average reference structures. Ramachandron plots. Real-time filtering of higher frequency molecular motions. PDB dump feature, for extracting movie frames on-the-fly.

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2024-Apr-16 to 2024-May-16