v 3.6.1 Updated: 2 years, 8 months ago

Bayesian co-estimation of phylogenies and multiple alignments via MCMC

BAli-Phy estimates multiple sequence alignments and evolutionary trees from DNA, amino acid, or codon sequences. It uses likelihood-based evolutionary models of substitutions and insertions and deletions to place gaps.

To install bali-phy, paste this in macOS terminal after installing MacPorts

sudo port install bali-phy

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