theseus (science/theseus) Add to my watchlist
A program for maximum likelihood superpositioning and analysis of macromolecular structuresVersion: 3.3.0 License: GPL-2+ GitHub
Maintainers | reneeotten |
Categories | science |
Homepage | https://theobald.brandeis.edu/theseus |
Platforms | darwin |
Variants |
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"theseus" depends on
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Port notes
The provided wrapper script 'theseus_align', runs THESEUS on multiple PDB files. This script transparently extracts the proper sequences from the PDB files, aligns them, and then performs the ML superposition based on that alignment.
It can use different alignment programs: MUSCLE and MAFFT are currently present in MacPorts; others (PROBCONS, CLUSTALW, CLUSTAL-OMEGA, T_COFFEE, KALIGN, DIALIGN2) can be utilized as well, but will require editing of the script located in: ${prefix}/bin/theseus_align ** MUSCLE will be used as alignment program by 'theseus_align' **
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