PLUMED is a plugin for molecular dynamics that can be used in combination with popular molecular dynamics codes to perform biased simulations. Additionally, it can be used as a standalone tool to analyze trajectories.
PLUMED is a plugin for molecular dynamics that can be used in combination with popular molecular dynamics codes to perform biased simulations. Additionally, it can be used as a standalone tool to analyze trajectories.
To install plumed, run the following command in macOS terminal (Applications->Utilities->Terminal)
sudo port install plumed
To see what files were installed by plumed, run:
port contents plumed
To later upgrade plumed, run:
sudo port selfupdate && sudo port upgrade plumed
Reporting an issue on MacPorts Trac
The MacPorts Project uses a system called Trac to file tickets to report bugs and enhancement requests.
Though anyone may search Trac for tickets, you must have a GitHub account in order to login to Trac to create tickets.