A 3D Stereo Molecular Dynamics Trajectory Visualization Package
MD Display turns molecular dynamics trajectory data into a colorful, animated, on-screen movie. Key features include: Mouse control of translation, rotation, scaling, and clipping. Half-bond coloring controls. Animation speed and direction controls. Dynamic monitoring of distances, bond angles, dihedrals, and hydrogen bonds. Superimposition of static initial or average reference structures. Ramachandron plots. Real-time filtering of higher frequency molecular motions. PDB dump feature, for extracting movie frames on-the-fly.
MD Display turns molecular dynamics trajectory data into a colorful, animated, on-screen movie. Key features include: Mouse control of translation, rotation, scaling, and clipping. Half-bond coloring controls. Animation speed and direction controls. Dynamic monitoring of distances, bond angles, dihedrals, and hydrogen bonds. Superimposition of static initial or average reference structures. Ramachandron plots. Real-time filtering of higher frequency molecular motions. PDB dump feature, for extracting movie frames on-the-fly.
To install mddisplay, run the following command in macOS terminal (Applications->Utilities->Terminal)
sudo port install mddisplay
To see what files were installed by mddisplay, run:
port contents mddisplay
To later upgrade mddisplay, run:
sudo port selfupdate && sudo port upgrade mddisplay
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