C library for accessing SAM, CRAM, VCF, BCF and other file formats used for high-throughput sequencing data
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM, VCF and BCF, used for high-throughput sequencing data. It is the core library used by SAMtools and BCFtools.
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM, VCF and BCF, used for high-throughput sequencing data. It is the core library used by SAMtools and BCFtools.
To install htslib, run the following command in macOS terminal (Applications->Utilities->Terminal)
sudo port install htslib
To see what files were installed by htslib, run:
port contents htslib
To later upgrade htslib, run:
sudo port selfupdate && sudo port upgrade htslib
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