bowtie
an ultrafast, memory-efficient short read aligner
Version: 1.3.1 | Maintained by: MarcusCalhoun-Lopez | Categories: science biology | Variants:bowtie2
Bowtie 2: Fast and sensitive read alignment
Version: 2.5.1 | Maintained by: MarcusCalhoun-Lopez | Categories: science biology | Variants:cell-id
Microscopy based cytometry segmentation software
Version: 1.4.6 | Maintained by: | Categories: science biology | Variants:cufflinks
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.
Version: 2.2.1 | Maintained by: ryandesign | Categories: science biology | Variants: universalmemesuite
Motif analysis toolkit
Version: 5.5.3 | Maintained by: CharlesEGrant, wsnoble, tlawbailey | Categories: science biology | Variants: serial, parallel, universalp5-eval
Eval is a flexible tool for analyzing the performance of gene-structure prediction programs.
Version: 2.2.8 | Maintained by: | Categories: perl biology | Variants:p5-ipe
Perl module for parameter estimation for Hidden Markov Models.
Version: 0.3.1 | Maintained by: | Categories: perl biology | Variants:p5.28-eval
Eval is a flexible tool for analyzing the performance of gene-structure prediction programs.
Version: 2.2.8 | Maintained by: | Categories: perl biology | Variants:p5.28-ipe
Perl module for parameter estimation for Hidden Markov Models.
Version: 0.3.1 | Maintained by: | Categories: perl biology | Variants: universalp5.30-eval
Eval is a flexible tool for analyzing the performance of gene-structure prediction programs.
Version: 2.2.8 | Maintained by: | Categories: perl biology | Variants:p5.30-ipe
Perl module for parameter estimation for Hidden Markov Models.
Version: 0.3.1 | Maintained by: | Categories: perl biology | Variants: universalp5.32-eval
Eval is a flexible tool for analyzing the performance of gene-structure prediction programs.
Version: 2.2.8 | Maintained by: | Categories: perl biology | Variants:p5.32-ipe
Perl module for parameter estimation for Hidden Markov Models.
Version: 0.3.1 | Maintained by: | Categories: perl biology | Variants: universalp5.34-eval
Eval is a flexible tool for analyzing the performance of gene-structure prediction programs.
Version: 2.2.8 | Maintained by: | Categories: perl biology | Variants:p5.34-ipe
Perl module for parameter estimation for Hidden Markov Models.
Version: 0.3.1 | Maintained by: | Categories: perl biology | Variants: universalraxml
Estimation of phylogenetic trees
Version: 8.2.12 | Maintained by: | Categories: science biology | Variants: clang10, clang11, clang12, clang50, clang60, clang70, clang80, clang90, clangdevel, gcc10, gcc11, gcc5, gcc6, gcc7, gcc8, gcc9, gccdevel, mpich, openmpi, hybrid, pthreads, sse3, avx, avx2, universaltophat
a fast splice junction mapper for RNA-Seq reads
Version: 2.1.2 | Maintained by: MarcusCalhoun-Lopez | Categories: science biology | Variants: universalvcellid
GTK GUI for cell-id
Version: 0.1 | Maintained by: | Categories: science biology | Variants: universal18 port(s) found