GET /api/v1/ports/cufflinks/
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{
"name": "cufflinks",
"portdir": "science/cufflinks",
"version": "2.2.1",
"license": "Boost-1",
"platforms": "darwin",
"epoch": 0,
"replaced_by": null,
"homepage": "http://cole-trapnell-lab.github.io/cufflinks/",
"description": "Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.",
"long_description": "Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one.",
"active": true,
"categories": [
"science",
"biology"
],
"maintainers": [
{
"name": "ryandesign",
"github": "ryandesign",
"ports_count": 1825
}
],
"variants": [
"universal"
],
"dependencies": [
{
"type": "build",
"ports": [
"samtools",
"clang-17"
]
},
{
"type": "lib",
"ports": [
"zlib",
"eigen3",
"htslib",
"boost171"
]
}
],
"depends_on": []
}